<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.3 20210610//EN" "JATS-journalpublishing1-3.dtd">
<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">pulmo</journal-id><journal-title-group><journal-title xml:lang="ru">Пульмонология</journal-title><trans-title-group xml:lang="en"><trans-title>PULMONOLOGIYA</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">0869-0189</issn><issn pub-type="epub">2541-9617</issn><publisher><publisher-name>Scientific and Practical Journal “PULMONOLOGIYA” LLC</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.18093/0869-0189-2022-32-4-608-615</article-id><article-id custom-type="elpub" pub-id-type="custom">pulmo-4140</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>ЛЕКЦИИ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>LECTIONS</subject></subj-group></article-categories><title-group><article-title>Генетические механизмы эссенциальной эмфиземы легких</article-title><trans-title-group xml:lang="en"><trans-title>Genetic mechanisms of primary lung emphysema</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Амирова</surname><given-names>Т. О.</given-names></name><name name-style="western" xml:lang="en"><surname>Amirova</surname><given-names>T. O.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Амирова Татьяна Олеговна – врач персонализированной медицины, генетик Клиники «Laboratoires Reunis, Dr. Amirova», член исследовательской группы по изучению системных биологических моделей полигенных заболеваний, аффилированной со Школой системной биологии, Университет Джорджа Мейсона (Фэрфакс, США), руководитель Школы прецизионной метаболомной медицины, Институт PreventAge, член Коалиции персонализированной медицины, преподаватель UniCapital Corp.</p><p>119296, Москва, Ленинский просп., 62 / 1</p><p>тел.: (495) 347-09-39</p></bio><bio xml:lang="en"><p>Tatyana O. Amirova, Doctor of personalized medicine, geneticist at Laboratoires Reunis, Member of polygenic diseases biological modelling research group, aﬃliated with School of Systems Biology, George Mason University (Fairfax, USA), Head of Precision Metabolomic Medicine School, PreventAge Institute; Member of Personalized Medicine Coalition, Faculty member of UCPC</p><p>Leninskiy prosp. 62/1, 119296, Moscow</p><p>tel.: (495) 347-09-39</p></bio><email xlink:type="simple">dr.amirova2000@gmail.com</email><xref ref-type="aff" rid="aff-1"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru"><institution>Клиника “Laboratoires Reunis, Dr. Amirova”com</institution><country>Россия</country></aff><aff xml:lang="en"><institution>Clinic “Laboratoires Reunis, Dr. Amirova”</institution><country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2022</year></pub-date><pub-date pub-type="epub"><day>17</day><month>08</month><year>2022</year></pub-date><volume>32</volume><issue>4</issue><fpage>608</fpage><lpage>615</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Амирова Т.О., 2022</copyright-statement><copyright-year>2022</copyright-year><copyright-holder xml:lang="ru">Амирова Т.О.</copyright-holder><copyright-holder xml:lang="en">Amirova T.O.</copyright-holder><license xml:lang="ru" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>Данная работа распространяется под лицензией Creative Commons Attribution 4.0.</license-p></license><license xml:lang="en" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://journal.pulmonology.ru/pulm/article/view/4140">https://journal.pulmonology.ru/pulm/article/view/4140</self-uri><abstract><p>Персонализированный подход к лечению полигенного заболевания, каким является эмфизема легких, предоставляет возможность выбора наиболее эффективных препаратов для каждого отдельного клинического случая. Прогресс в понимании молекулярных механизмов этого заболевания позволяет по-новому взглянуть на классификацию, причины вариабельности фенотипа, прогноз, возможность превентивных мер до развития развернутой клинической картины.</p><p>Целью данной работы было собрать воедино имеющиеся данные о вкладе генетических мутаций в развитие эмфиземы легких, охарактеризовать эндотипы, определить направления персонализированного лечения.</p><sec><title>Результаты</title><p>Результаты. Внимание клиницистов при диагностике эссенциальной эмфиземы сфокусировано на определении в сыворотке крови уровня α1-антитрипсина и мутаций гена SERPINA1 в 3, 4, 5 и 6-м экзонах. Это важная, но не полная информация о причинах и прогнозе течения заболевания. Она не учитывает влияния генов-модификаторов и межгенных взаимодействий. При этом интактный ген SERPINA1 не является гарантом отсутствия предпосылок к развитию эссенциальной эмфиземы. На сегодняшний день определен спектр генетических дефектов, в бóльшей или меньшей степени способных вызывать заболевание, определять его клинические проявления, тяжесть и частоту обострений.</p></sec><sec><title>Заключение</title><p>Заключение. Полноэкзомное секвенирование с определением пораженных метаболических путей дает возможность увидеть полный молекулярный «портрет» эмфиземы, определить эндотип и выбирать таргетную терапию для каждого отдельного клинического случая.</p></sec></abstract><trans-abstract xml:lang="en"><p>A personalized approach to the treatment of a polygenic disease, such as pulmonary emphysema, provides unique opportunities for selection of effective treatment in each clinical case. Progress of understanding molecular mechanisms behind emphysema allows to take a new look at classification, causes of phenotype variability, prognosis and preventive measures before clinical manifestation.</p><p>The aim of this review was to bring together the available data of genetic mutations impact to lung emphysema, its endotypes characteristics, and determine the personalized treatment approaches.</p><sec><title>Results</title><p>Results. The attention of clinicians in the diagnosis of essential emphysema is focused on measurement the level of α1-antitrypsin in serum and mutations of SERPINA1 gene in exons 3, 4, 5 and 6. This is important, though not complete information about the causes and disease prognosis. This routine approach do not take into account the influence of genes-modifiers and gene-gene interactions. At the same time, intact SERPINA1 does not guarantee a zero risk of primary emphysema. To date, a wide range of genetic defects has been identified. These defects are capable, to a varying degree, to cause the disease, determine its clinical manifestations, severity and frequency of exacerbations.</p></sec><sec><title>Conclusion</title><p>Conclusion. Wholeexome sequencing with the identification of affected metabolic pathways makes it possible to see a complete molecular portrait of emphysema, determine the endotype and select targeted therapy for each clinical case.</p></sec></trans-abstract><kwd-group xml:lang="ru"><kwd>генетика эмфиземы</kwd><kwd>SERPINA1</kwd><kwd>гены-модификаторы</kwd><kwd>полноэкзомные исследования</kwd><kwd>эндотипы эмфиземы</kwd></kwd-group><kwd-group xml:lang="en"><kwd>emphysema genetics</kwd><kwd>SERPINA1</kwd><kwd>modifier genes</kwd><kwd>whole-exome studies</kwd><kwd>emphysema endotypes</kwd></kwd-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Prevalence and attributable health burden of chronic respiratory diseases, 1990–2017: a systematic analysis for the Global Burden of Disease Study 2017. Lancet Respir. Med. 2020; 8 (6): 585–596. DOI: 10.1016/S2213-2600(20)30105-3.</mixed-citation><mixed-citation xml:lang="en">Prevalence and attributable health burden of chronic respiratory diseases, 1990–2017: a systematic analysis for the Global Burden of Disease Study 2017. Lancet Respir. Med. 2020; 8 (6): 585–596. DOI: 10.1016/S2213-2600(20)30105-3.</mixed-citation></citation-alternatives></ref><ref id="cit2"><label>2</label><citation-alternatives><mixed-citation xml:lang="ru">Brode S.K., Ling S.C., Chapman K.R. Alpha-1 antitrypsin deﬁ-ciency: a commonly overlooked cause of lung disease. CMAJ. 2012; 184 (12): 1365–1371. DOI: 10.1503/cmaj.111749.</mixed-citation><mixed-citation xml:lang="en">Brode S.K., Ling S.C., Chapman K.R. Alpha-1 antitrypsin deﬁ-ciency: a commonly overlooked cause of lung disease. CMAJ. 2012; 184 (12): 1365–1371. DOI: 10.1503/cmaj.111749.</mixed-citation></citation-alternatives></ref><ref id="cit3"><label>3</label><citation-alternatives><mixed-citation xml:lang="ru">de Serres F., Blanco I. Role of alpha-1 antitrypsin in human health and disease. J. Intern. Med. 2014; 276 (4): 311–335. DOI: 10.1111/joim.12239.</mixed-citation><mixed-citation xml:lang="en">de Serres F., Blanco I. Role of alpha-1 antitrypsin in human health and disease. J. Intern. Med. 2014; 276 (4): 311–335. DOI: 10.1111/joim.12239.</mixed-citation></citation-alternatives></ref><ref id="cit4"><label>4</label><citation-alternatives><mixed-citation xml:lang="ru">Чучалин А.Г. Эмфизема. Пульмонология. 1998; (1): 6–13. Доступно на: https://journal.pulmonology.ru/pulm/article/view/3206/2602</mixed-citation><mixed-citation xml:lang="en">Chuchalin A.G. [Emphyzema]. Pul’monologiya. 1998; (1): 6–13. Available at: https://journal.pulmonology.ru/pulm/article/view/3206/2602 (in Russian).</mixed-citation></citation-alternatives></ref><ref id="cit5"><label>5</label><citation-alternatives><mixed-citation xml:lang="ru">Cantin A.M. Cystic ﬁbrosis transmembrane conductance regulator. Implications in cystic ﬁbrosis and chronic obstructive pulmonary disease. Ann. Am. Thorac. Soc. 2016; 13 (Suppl. 2): S150–155. DOI: 10.1513/AnnalsATS.201509-588KV.</mixed-citation><mixed-citation xml:lang="en">Cantin A.M. Cystic ﬁbrosis transmembrane conductance regulator. Implications in cystic ﬁbrosis and chronic obstructive pulmonary disease. Ann. Am. Thorac. Soc. 2016; 13 (Suppl. 2): S150–155. DOI: 10.1513/AnnalsATS.201509-588KV.</mixed-citation></citation-alternatives></ref><ref id="cit6"><label>6</label><citation-alternatives><mixed-citation xml:lang="ru">Thorgeirsson T.E., Gudbjartsson D.F., Surakka I. et al. Sequence variants at CHRNB3-CHRNA6 and CYP2A6 aﬀect smoking behavior. Nat. Genet. 2010; 42 (5): 448–453. DOI: 10.1038/ng.573.</mixed-citation><mixed-citation xml:lang="en">Thorgeirsson T.E., Gudbjartsson D.F., Surakka I. et al. Sequence variants at CHRNB3-CHRNA6 and CYP2A6 aﬀect smoking behavior. Nat. Genet. 2010; 42 (5): 448–453. DOI: 10.1038/ng.573.</mixed-citation></citation-alternatives></ref><ref id="cit7"><label>7</label><citation-alternatives><mixed-citation xml:lang="ru">Fowler C.D., Lu Q., Johnson P.M. et al. Habenular alpha5 nicotinic receptor subunit signalling controls nicotine intake. Nature. 2011; 471 (7340): 597–601. DOI: 10.1038/nature09797.</mixed-citation><mixed-citation xml:lang="en">Fowler C.D., Lu Q., Johnson P.M. et al. Habenular alpha5 nicotinic receptor subunit signalling controls nicotine intake. Nature. 2011; 471 (7340): 597–601. DOI: 10.1038/nature09797.</mixed-citation></citation-alternatives></ref><ref id="cit8"><label>8</label><citation-alternatives><mixed-citation xml:lang="ru">Castaldi P.J., Cho M.H., Zhou X. et al. Genetic control of gene expression at novel and established chronic obstructive pulmonary disease loci. Hum. Mol. Genet. 2015; 24 (4):1200–1210. DOI: 10.1093/hmg/ddu525.</mixed-citation><mixed-citation xml:lang="en">Castaldi P.J., Cho M.H., Zhou X. et al. Genetic control of gene expression at novel and established chronic obstructive pulmonary disease loci. Hum. Mol. Genet. 2015; 24 (4):1200–1210. DOI: 10.1093/hmg/ddu525.</mixed-citation></citation-alternatives></ref><ref id="cit9"><label>9</label><citation-alternatives><mixed-citation xml:lang="ru">Tobin M. Common and rare genetic variants in respiratory health: the UK Biobank Lung Exome Variant Evaluation (UK BiLEVE) consortium. 2012. https://www.ukbiobank.ac.uk/enable-your-research/approved-research/common-and-rare-genetic-variants-in-respiratory-health-the-uk-biobank-lung-exome-variant-evaluation-uk-bileve-consortium</mixed-citation><mixed-citation xml:lang="en">Tobin M. Common and rare genetic variants in respiratory health: the UK Biobank Lung Exome Variant Evaluation (UK BiLEVE) consortium. 2012. https://www.ukbiobank.ac.uk/enable-your-research/approved-research/common-and-rare-genetic-variants-in-respiratory-health-the-uk-biobank-lung-exome-variant-evaluation-uk-bileve-consortium</mixed-citation></citation-alternatives></ref><ref id="cit10"><label>10</label><citation-alternatives><mixed-citation xml:lang="ru">Stylianou P., Clark K., Gooptu B. et al. Tensin1 expression and function in chronic obstructive pulmonary disease. Nature. 2019; 9 (1): 18942. DOI: 10.1038/s41598-019-55405-2.</mixed-citation><mixed-citation xml:lang="en">Stylianou P., Clark K., Gooptu B. et al. Tensin1 expression and function in chronic obstructive pulmonary disease. Nature. 2019; 9 (1): 18942. DOI: 10.1038/s41598-019-55405-2.</mixed-citation></citation-alternatives></ref><ref id="cit11"><label>11</label><citation-alternatives><mixed-citation xml:lang="ru">Sandford A.J., Chagani T., Weir T.D. et al. Susceptibility genes for rapid decline of lung function in the lung health study. Am. J. Respir. Crit. Care Med. 2001; 163 (2): 469–473. DOI: 10.1164/ajrccm.163.2.2006158.</mixed-citation><mixed-citation xml:lang="en">Sandford A.J., Chagani T., Weir T.D. et al. Susceptibility genes for rapid decline of lung function in the lung health study. Am. J. Respir. Crit. Care Med. 2001; 163 (2): 469–473. DOI: 10.1164/ajrccm.163.2.2006158.</mixed-citation></citation-alternatives></ref><ref id="cit12"><label>12</label><citation-alternatives><mixed-citation xml:lang="ru">Pare P.D. The smoking gun: Genetics and genomics reveal causal pathways for COPD. Canadian J. Respir. Crit. Care Sleep Med. 2017; 1 (3): 126–132. DOI: 10.1080/24745332.2017.1361203.</mixed-citation><mixed-citation xml:lang="en">Pare P.D. The smoking gun: Genetics and genomics reveal causal pathways for COPD. Canadian J. Respir. Crit. Care Sleep Med. 2017; 1 (3): 126–132. DOI: 10.1080/24745332.2017.1361203.</mixed-citation></citation-alternatives></ref><ref id="cit13"><label>13</label><citation-alternatives><mixed-citation xml:lang="ru">Chen Q., de Vries M., Nwozor K.O. et al. A protective role of FAM13A in human airway epithelial cells upon exposure to cigarette smoke extract. Front. Physiol. 2021; 12: 690936. DOI: 10.3389/fphys.2021.690936.</mixed-citation><mixed-citation xml:lang="en">Chen Q., de Vries M., Nwozor K.O. et al. A protective role of FAM13A in human airway epithelial cells upon exposure to cigarette smoke extract. Front. Physiol. 2021; 12: 690936. DOI: 10.3389/fphys.2021.690936.</mixed-citation></citation-alternatives></ref><ref id="cit14"><label>14</label><citation-alternatives><mixed-citation xml:lang="ru">Churg A., Zhou S., Wright J.L. Matrix metalloproteinases in COPD. Eur. Respir. J. 2012; 39 (1): 197–209. DOI: 10.1183/09031936.00121611.</mixed-citation><mixed-citation xml:lang="en">Churg A., Zhou S., Wright J.L. Matrix metalloproteinases in COPD. Eur. Respir. J. 2012; 39 (1): 197–209. DOI: 10.1183/09031936.00121611.</mixed-citation></citation-alternatives></ref><ref id="cit15"><label>15</label><citation-alternatives><mixed-citation xml:lang="ru">Qiu S.L., Duan M.C., Liang Y. et al. Cigarette smoke Induction of Interleukin-27/WSX-1 regulates the diﬀerentiation of Th1 and Th17 cells in a smoking mouse model of emphysema. Front. Immunol. 2016; 7: 553. DOI: 10.3389/ﬁmmu.2016.00553.</mixed-citation><mixed-citation xml:lang="en">Qiu S.L., Duan M.C., Liang Y. et al. Cigarette smoke Induction of Interleukin-27/WSX-1 regulates the diﬀerentiation of Th1 and Th17 cells in a smoking mouse model of emphysema. Front. Immunol. 2016; 7: 553. DOI: 10.3389/ﬁmmu.2016.00553.</mixed-citation></citation-alternatives></ref><ref id="cit16"><label>16</label><citation-alternatives><mixed-citation xml:lang="ru">Sharma A., Kaur S., Sarkar M. et al. The AGE-RAGE axis and RAGE genetics in chronic obstructive pulmonary disease. Clin. Rev. Allergy Immunol. 2021; 60 (2): 244–258. DOI: 10.1007/s12016-020-08815-4.</mixed-citation><mixed-citation xml:lang="en">Sharma A., Kaur S., Sarkar M. et al. The AGE-RAGE axis and RAGE genetics in chronic obstructive pulmonary disease. Clin. Rev. Allergy Immunol. 2021; 60 (2): 244–258. DOI: 10.1007/s12016-020-08815-4.</mixed-citation></citation-alternatives></ref><ref id="cit17"><label>17</label><citation-alternatives><mixed-citation xml:lang="ru">Angata T., Ishii T., Motegi T. et al. Loss of Siglec-14 reduces the risk of chronic obstructive pulmonary disease exacerbation. Cell. Mol. Life Sci. 2013; 70 (17): 3199–3210. DOI:10.1007/s00018-013-1311-7.</mixed-citation><mixed-citation xml:lang="en">Angata T., Ishii T., Motegi T. et al. Loss of Siglec-14 reduces the risk of chronic obstructive pulmonary disease exacerbation. Cell. Mol. Life Sci. 2013; 70 (17): 3199–3210. DOI:10.1007/s00018-013-1311-7.</mixed-citation></citation-alternatives></ref><ref id="cit18"><label>18</label><citation-alternatives><mixed-citation xml:lang="ru">Yoo S., Takikawa S., Geraghty P. et al. Integrative analysis of DNA methylation and gene expression data identiﬁes EPAS1 as a key regulator of COPD. PLoS Genet. 2015; 11 (1): e1004898. DOI: 10.1371/journal.pgen.1004898.</mixed-citation><mixed-citation xml:lang="en">Yoo S., Takikawa S., Geraghty P. et al. Integrative analysis of DNA methylation and gene expression data identiﬁes EPAS1 as a key regulator of COPD. PLoS Genet. 2015; 11 (1): e1004898. DOI: 10.1371/journal.pgen.1004898.</mixed-citation></citation-alternatives></ref><ref id="cit19"><label>19</label><citation-alternatives><mixed-citation xml:lang="ru">Brehm J.M., Hagiwara K., Tesfaigzi Y. et al. Identiﬁcation of FGF7 as a novel susceptibility locus for chronic obstructive pulmonary disease. Thorax. 2011; 66 (12): 1085–1090. DOI: 10.1136/thoraxjnl-2011-200017.</mixed-citation><mixed-citation xml:lang="en">Brehm J.M., Hagiwara K., Tesfaigzi Y. et al. Identiﬁcation of FGF7 as a novel susceptibility locus for chronic obstructive pulmonary disease. Thorax. 2011; 66 (12): 1085–1090. DOI: 10.1136/thoraxjnl-2011-200017.</mixed-citation></citation-alternatives></ref><ref id="cit20"><label>20</label><citation-alternatives><mixed-citation xml:lang="ru">Brandsma C.A., van den Berge M., Postma D.S. et al. A large lung gene expression study identifying ﬁbulin-5 as a novel player in tissue repair in COPD. Thorax. 2015; 70 (1): 21–32. DOI: 10.1136/thoraxjnl-2014-205091.</mixed-citation><mixed-citation xml:lang="en">Brandsma C.A., van den Berge M., Postma D.S. et al. A large lung gene expression study identifying ﬁbulin-5 as a novel player in tissue repair in COPD. Thorax. 2015; 70 (1): 21–32. DOI: 10.1136/thoraxjnl-2014-205091.</mixed-citation></citation-alternatives></ref></ref-list><fn-group><fn fn-type="conflict"><p>The authors declare that there are no conflicts of interest present.</p></fn></fn-group></back></article>
